A0A2H3E2X6 protein (Armillaria gallica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3E2X6

P-loop containing nucleoside triphosphate hydrolase protein. (342 aa)

Predicted Functional Partners:

A0A2H3D926

0.999

A0A2H3DWV5

0.999

A0A2H3E6U5

0.999

A0A2H3E7K9

0.999

A0A2H3E802

0.999

A0A2H3E2G6

0.997

A0A2H3CX14

0.989

A0A2H3E8N5

0.989

A0A2H3DCA2

0.985

A0A2H3DC90

0.984

Your Current Organism:

Armillaria gallica

NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3CX14	A0A2H3D926	Uncharacterized protein.	Rad17-domain-containing protein.	0.886
A0A2H3CX14	A0A2H3DC90	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.836
A0A2H3CX14	A0A2H3DCA2	Uncharacterized protein.	Uncharacterized protein.	0.590
A0A2H3CX14	A0A2H3DWV5	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.988
A0A2H3CX14	A0A2H3E2G6	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.999
A0A2H3CX14	A0A2H3E2X6	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.989
A0A2H3CX14	A0A2H3E6U5	Uncharacterized protein.	Replication factor C subunit 1.	0.958
A0A2H3CX14	A0A2H3E7K9	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.992
A0A2H3CX14	A0A2H3E802	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.993
A0A2H3CX14	A0A2H3E8N5	Uncharacterized protein.	DNA/RNA polymerase.	0.838
A0A2H3D926	A0A2H3CX14	Rad17-domain-containing protein.	Uncharacterized protein.	0.886
A0A2H3D926	A0A2H3DC90	Rad17-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.956
A0A2H3D926	A0A2H3DCA2	Rad17-domain-containing protein.	Uncharacterized protein.	0.991
A0A2H3D926	A0A2H3DWV5	Rad17-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.999
A0A2H3D926	A0A2H3E2G6	Rad17-domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.973
A0A2H3D926	A0A2H3E2X6	Rad17-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.999
A0A2H3D926	A0A2H3E6U5	Rad17-domain-containing protein.	Replication factor C subunit 1.	0.964
A0A2H3D926	A0A2H3E7K9	Rad17-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.999
A0A2H3D926	A0A2H3E802	Rad17-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.999
A0A2H3D926	A0A2H3E8N5	Rad17-domain-containing protein.	DNA/RNA polymerase.	0.886