A0A2H3E8V9 protein (Armillaria gallica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3E8V9

CRAL/TRIO domain-containing protein. (310 aa)

Predicted Functional Partners:

A0A2H3DZS8

0.817

A0A2H3DU94

0.750

A0A2H3DX96

0.716

A0A2H3DZS9

0.668

A0A2H3CXC1

0.636

A0A2H3E6S4

0.633

A0A2H3CYM9

0.623

A0A2H3DYS1

0.623

A0A2H3E8I2

0.617

A0A2H3E344

0.607

Your Current Organism:

Armillaria gallica

NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3CXC1	A0A2H3CYM9	Ras-domain-containing protein.	ARM repeat-containing protein.	0.789
A0A2H3CXC1	A0A2H3DU94	Ras-domain-containing protein.	CRAL/TRIO domain-containing protein.	0.652
A0A2H3CXC1	A0A2H3DX96	Ras-domain-containing protein.	CRAL/TRIO domain-containing protein.	0.647
A0A2H3CXC1	A0A2H3DYS1	Ras-domain-containing protein.	AP-1 complex subunit gamma.	0.789
A0A2H3CXC1	A0A2H3DZS8	Ras-domain-containing protein.	CRAL-TRIO domain-containing protein.	0.691
A0A2H3CXC1	A0A2H3E344	Ras-domain-containing protein.	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	0.882
A0A2H3CXC1	A0A2H3E6S4	Ras-domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.786
A0A2H3CXC1	A0A2H3E8I2	Ras-domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.698
A0A2H3CXC1	A0A2H3E8V9	Ras-domain-containing protein.	CRAL/TRIO domain-containing protein.	0.636
A0A2H3CYM9	A0A2H3CXC1	ARM repeat-containing protein.	Ras-domain-containing protein.	0.789
A0A2H3CYM9	A0A2H3DU94	ARM repeat-containing protein.	CRAL/TRIO domain-containing protein.	0.623
A0A2H3CYM9	A0A2H3DX96	ARM repeat-containing protein.	CRAL/TRIO domain-containing protein.	0.623
A0A2H3CYM9	A0A2H3DZS8	ARM repeat-containing protein.	CRAL-TRIO domain-containing protein.	0.623
A0A2H3CYM9	A0A2H3E344	ARM repeat-containing protein.	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	0.976
A0A2H3CYM9	A0A2H3E6S4	ARM repeat-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.960
A0A2H3CYM9	A0A2H3E8I2	ARM repeat-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.975
A0A2H3CYM9	A0A2H3E8V9	ARM repeat-containing protein.	CRAL/TRIO domain-containing protein.	0.623
A0A2H3DU94	A0A2H3CXC1	CRAL/TRIO domain-containing protein.	Ras-domain-containing protein.	0.652
A0A2H3DU94	A0A2H3CYM9	CRAL/TRIO domain-containing protein.	ARM repeat-containing protein.	0.623
A0A2H3DU94	A0A2H3DYS1	CRAL/TRIO domain-containing protein.	AP-1 complex subunit gamma.	0.637