A0A2H3EAI4 protein (Armillaria gallica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3EAI4

RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (88 aa)

Predicted Functional Partners:

A0A2H3E860

0.967

A0A2H3E4H3

0.913

A0A2H3ENL3

0.902

A0A2H3DSE6

0.890

A0A2H3DPH5

0.866

A0A2H3DKS9

0.861

A0A2H3E8R8

0.849

A0A2H3D6Y4

0.840

A0A2H3DBX9

0.840

A0A2H3EM34

0.839

Your Current Organism:

Armillaria gallica

NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3D6Y4	A0A2H3DKS9	Uncharacterized protein.	YL1_C domain-containing protein.	0.812
A0A2H3D6Y4	A0A2H3DPH5	Uncharacterized protein.	YL1_C domain-containing protein.	0.962
A0A2H3D6Y4	A0A2H3DSE6	Uncharacterized protein.	Yeats-domain-containing protein.	0.960
A0A2H3D6Y4	A0A2H3E4H3	Uncharacterized protein.	Myb-like domain-containing protein.	0.967
A0A2H3D6Y4	A0A2H3E860	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.967
A0A2H3D6Y4	A0A2H3E8R8	Uncharacterized protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.820
A0A2H3D6Y4	A0A2H3EAI4	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.840
A0A2H3D6Y4	A0A2H3ENL3	Uncharacterized protein.	Actin-related protein Arp4p; Belongs to the actin family.	0.964
A0A2H3DBX9	A0A2H3DKS9	Uncharacterized protein.	YL1_C domain-containing protein.	0.812
A0A2H3DBX9	A0A2H3DPH5	Uncharacterized protein.	YL1_C domain-containing protein.	0.962
A0A2H3DBX9	A0A2H3DSE6	Uncharacterized protein.	Yeats-domain-containing protein.	0.960
A0A2H3DBX9	A0A2H3E4H3	Uncharacterized protein.	Myb-like domain-containing protein.	0.967
A0A2H3DBX9	A0A2H3E860	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.967
A0A2H3DBX9	A0A2H3E8R8	Uncharacterized protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.820
A0A2H3DBX9	A0A2H3EAI4	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.840
A0A2H3DBX9	A0A2H3ENL3	Uncharacterized protein.	Actin-related protein Arp4p; Belongs to the actin family.	0.964
A0A2H3DKS9	A0A2H3D6Y4	YL1_C domain-containing protein.	Uncharacterized protein.	0.812
A0A2H3DKS9	A0A2H3DBX9	YL1_C domain-containing protein.	Uncharacterized protein.	0.812
A0A2H3DKS9	A0A2H3DSE6	YL1_C domain-containing protein.	Yeats-domain-containing protein.	0.581
A0A2H3DKS9	A0A2H3E860	YL1_C domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.992