STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3EI89UBC-like protein. (225 aa)    
Predicted Functional Partners:
A0A2H3E9W7
HOOK-domain-containing protein.
   
 
 0.896
A0A2H3DRX4
Uncharacterized protein.
    
 
 0.836
A0A2H3E7H3
GAR domain-containing protein.
   
   0.730
A0A2H3E2P4
Ubiquitin.
    
  0.468
A0A2H3E589
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.443
A0A2H3E0B3
HECT domain-containing protein.
     
 0.438
A0A2H3DQB1
U-box domain-containing protein.
     
 0.432
A0A2H3CZD3
FAS1 domain-containing protein.
    
   0.422
A0A2H3DZX4
E2_bind domain-containing protein.
     
 0.422
A0A2H3E1N0
Uncharacterized protein.
    
   0.422
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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