STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3EJ09Uncharacterized protein. (165 aa)    
Predicted Functional Partners:
A0A2H3D865
Uncharacterized protein.
   
   0.983
A0A2H3EH54
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.970
A0A2H3EGX8
60S ribosomal protein L5.
   
 0.969
A0A2H3EMB8
60S ribosomal protein L32.
   
 0.969
A0A2H3CH06
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.968
A0A2H3DDT1
60S ribosomal protein L31.
   
 0.968
A0A2H3DVU5
L30e-like protein.
   
 0.968
A0A2H3DX19
Uncharacterized protein.
   
 0.968
A0A2H3E477
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.968
A0A2H3E772
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.968
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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