STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3EP76Cyclin-like protein; Belongs to the cyclin family. (343 aa)    
Predicted Functional Partners:
A0A2H3DWR2
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.999
A0A2H3E9P3
CDK-activating kinase assembly factor.
   
 0.999
A0A2H3D896
Tfb4-domain-containing protein.
   
 0.995
A0A2H3CUT7
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.992
A0A2H3DNN7
DNA repair helicase.
    
 0.992
A0A2H3DPH8
TFIIE beta domain-containing protein.
    
 0.991
A0A2H3DKV9
BSD domain-containing protein.
    
 0.988
A0A2H3E8I8
DNA helicase.
    
 0.986
A0A2H3DTJ0
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
   
 0.984
A0A2H3EME2
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.984
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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