STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3EQH9Isopentenyldiphosphate isomerase. (251 aa)    
Predicted Functional Partners:
A0A2H3DX50
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 
 0.982
A0A2H3DWK2
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.954
A0A2H3DVV4
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.939
A0A2H3ERT3
Squalene synthase.
 
 
 0.911
A0A2H3DWT3
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
  
 0.899
A0A2H3DRN5
Squalene epoxidase-like protein.
   
  
 0.894
A0A2H3D328
Uncharacterized protein.
  
 
 0.838
A0A2H3DW51
Uncharacterized protein.
  
 
 0.838
A0A2H3DMI9
tRNA isopentenyltransferase.
     
 0.807
A0A2H3DY13
3-hydroxy-3-methylglutaryl coenzyme A reductase.
 
  
 0.801
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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