STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3ESP7Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (374 aa)    
Predicted Functional Partners:
A0A2H3CL76
Puf family RNA-binding protein.
   
 
 0.948
A0A2H3DBS9
ARM repeat-containing protein.
    
   0.937
A0A2H3E526
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.937
A0A2H3DQF1
RNA-binding domain-containing protein.
   
   0.921
A0A2H3EEG3
Brix-domain-containing protein.
   
   0.921
A0A2H3D2Y9
RNA-binding domain-containing protein.
   
   0.914
A0A2H3E7M4
Ebp2-domain-containing protein.
   
   0.910
A0A2H3DES4
Noc2-domain-containing protein.
   
 
 0.899
A0A2H3E3U7
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
   
 
 0.898
A0A2H3ETU5
Cell adhesion protein byn-1.
   
 
 0.897
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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