STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_01093Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (196 aa)    
Predicted Functional Partners:
ARMOST_09744
Related to calnexin.
    
 
 0.790
ARMOST_16321
Related to surfeit locus protein 4.
   
 
 0.744
ARMOST_00642
Related to ATP5-F1F0-ATPase complex, OSCP subunit.
    
   0.610
ARMOST_04959
WD_REPEATS_REGION domain-containing protein.
   
 
 0.578
ARMOST_05578
Related to EMP24 protein.
   
 
 0.565
ARMOST_08958
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 
 0.554
ARMOST_06014
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 
 0.535
ARMOST_14501
Related to endoplasmic reticulum 25 kDa transmembrane protein.
   
 
 0.515
ARMOST_01412
ER lumen protein-retaining receptor.
   
  
 0.512
ARMOST_05259
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.465
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.