STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_02835Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
ARMOST_11250
Related to Nucleolar protein 56.
   
 0.986
ARMOST_04716
Related to NOP58-required for pre-18S rRNA processing.
   
 0.985
ARMOST_03926
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.973
ARMOST_04219
U3 small nucleolar RNA-associated protein 22.
   
 0.973
ARMOST_05348
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.973
ARMOST_13516
Related to RRP9-protein associated with the U3 small nucleolar RNA.
   
 0.972
ARMOST_09261
WD_REPEATS_REGION domain-containing protein.
   
 0.968
ARMOST_05372
Related to UTP15-nucleolar protein, component of the small subunit processome.
   
 0.962
ARMOST_14613
BP28CT domain-containing protein.
   
 0.959
ARMOST_05890
RRM domain-containing protein.
   
 0.954
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.