STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_05778Related to Vesicular-fusion protein sec18. (826 aa)    
Predicted Functional Partners:
ARMOST_09410
Related to SLY1 protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.989
ARMOST_12565
V-SNARE coiled-coil homology domain-containing protein.
   
 0.962
ARMOST_05513
Probable SEC22-synaptobrevin (V-SNARE); Belongs to the synaptobrevin family.
    
 0.953
ARMOST_07274
Related to syntaxin 12.
   
 0.949
ARMOST_10668
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.949
ARMOST_03601
Related to SSO1-syntaxin-related protein.
    
 0.944
ARMOST_19171
SynN domain-containing protein.
    
 0.944
ARMOST_09252
Related to BET1-Type II membrane protein required for vesicular transport between ER and Golgi.
    
 0.942
ARMOST_02394
t-SNARE coiled-coil homology domain-containing protein.
    
 0.937
ARMOST_06014
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.936
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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