STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_06693Uncharacterized protein. (606 aa)    
Predicted Functional Partners:
ARMOST_03457
DNA_pol_D_N domain-containing protein.
    
 0.787
ARMOST_09342
Small nuclear ribonucleoprotein Sm D2.
    
 0.749
ARMOST_09657
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.708
ARMOST_05059
Probable Small nuclear ribonucleoprotein F.
    
  0.707
ARMOST_00432
Uncharacterized protein.
    
 0.663
ARMOST_03463
ERCC4 domain-containing protein.
    
 0.663
ARMOST_06485
Uncharacterized protein.
    
 0.638
ARMOST_06481
Uncharacterized protein.
    
 0.638
ARMOST_11151
Uncharacterized protein.
    
 0.638
ARMOST_07059
DNA polymerase.
   
 0.637
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.