STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_08813Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (144 aa)    
Predicted Functional Partners:
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.998
ARMOST_00651
Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.998
ARMOST_00792
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.998
ARMOST_00812
Probable 40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.998
ARMOST_02054
Probable RPL28-60S large subunit ribosomal protein L27a.e; Belongs to the universal ribosomal protein uL15 family.
  
 0.998
ARMOST_03243
Probable 40s ribosomal protein s20.
  
 0.998
ARMOST_03248
40S ribosomal protein S28.
  
 0.998
ARMOST_03833
Deacetylase sirtuin-type domain-containing protein.
  
 0.998
ARMOST_04012
Related to RPL14B-ribosomal protein.
  
 0.998
ARMOST_04094
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.998
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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