STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_09556Related to Sorting nexin-4. (469 aa)    
Predicted Functional Partners:
ARMOST_07057
Related to Sorting nexin-41.
    
0.983
ARMOST_00600
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.864
ARMOST_15688
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.853
ARMOST_05245
Probable PEP8-vacuolar protein sorting/targeting protein.
    
 
 0.766
ARMOST_13171
Probable PEP8-vacuolar protein sorting/targeting protein.
    
 
 0.766
ARMOST_13928
Uncharacterized protein.
    
 
 0.766
ARMOST_15442
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.764
ARMOST_12565
V-SNARE coiled-coil homology domain-containing protein.
    
 0.717
ARMOST_05377
PX domain-containing protein.
    
 
 0.714
ARMOST_09594
Related to cytoskeleton assembly control protein.
    
 0.702
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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