STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_10694Uncharacterized protein. (374 aa)    
Predicted Functional Partners:
ARMOST_09761
Related to Chromatin assembly factor 1 subunit c.
   
 0.837
ARMOST_12084
Uncharacterized protein.
   
 
 0.735
ARMOST_05144
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
    
   0.698
ARMOST_09654
Related to RRP5-processing of pre-ribosomal RNA.
   
   0.648
ARMOST_05310
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
    
   0.629
ARMOST_03847
Related to 50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.625
ARMOST_07773
Related to MRPL10-mitochondrial ribosomal protein, large subunit.
    
 
 0.622
ARMOST_04975
Related to MRP2-mitochondrial ribosomal protein, small subunit.
    
 
 0.621
ARMOST_00651
Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.611
ARMOST_03833
Deacetylase sirtuin-type domain-containing protein.
    
 
 0.610
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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