STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_13687Related to exopolygalacturonase; Belongs to the glycosyl hydrolase 28 family. (331 aa)    
Predicted Functional Partners:
ARMOST_05143
Probable RPN11-26S proteasome regulatory subunit.
    
  0.646
ARMOST_07382
Probable ubiquitin/ribosomal protein S27a fusion protein.
    
  0.639
ARMOST_18073
Related to Probable alpha-N-arabinofuranosidase C.
     
 0.633
ARMOST_16920
Probable 60s ribosomal protein L21-A.
   
   0.630
ARMOST_11912
Related to beta-xylosidase.
    
 0.598
ARMOST_16366
Related to beta-xylosidase.
    
 0.598
ARMOST_05008
Uncharacterized protein.
    
 0.594
ARMOST_17277
Uncharacterized protein.
  
  
  0.589
ARMOST_05960
Related to 50S ribosomal protein L13.
   
   0.586
ARMOST_13804
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.582
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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