STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_14801Uncharacterized protein. (730 aa)    
Predicted Functional Partners:
ARMOST_06937
annotation not available
  
  
 
0.754
ARMOST_14802
ABC transmembrane type-1 domain-containing protein.
 
      0.629
ARMOST_15645
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.601
ARMOST_05099
AAA domain-containing protein.
    
 0.599
ARMOST_17202
Probable CDC48-Microsomal protein of CDC48/PAS1/SEC18 family of ATPases; Belongs to the AAA ATPase family.
    
 0.599
ARMOST_18725
Related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family.
    
 0.599
ARMOST_11371
RING-type domain-containing protein.
    
 0.562
ARMOST_21338
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.559
ARMOST_22017
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.559
ARMOST_15752
ABC transporter domain-containing protein.
  
 
 0.554
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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