STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_16405Methyltransf_25 domain-containing protein. (349 aa)    
Predicted Functional Partners:
ARMOST_07982
Related to TRM112-subunit of tRNA methyltransferase complex.
   
 0.717
ARMOST_00406
Related to TSR1-protein involved in 20S rRNA accumulation.
   
  0.689
ARMOST_00651
Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.676
ARMOST_14748
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.676
ARMOST_04859
Uncharacterized protein.
   
 0.675
ARMOST_09100
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.669
ARMOST_09221
40S ribosomal protein S27.
    
  0.667
ARMOST_00792
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.664
ARMOST_05001
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.664
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.664
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.