STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_16503Phenylalanine ammonia-lyase. (702 aa)    
Predicted Functional Partners:
ARMOST_05211
Histidine biosynthesis trifunctional protein.
    
 0.846
ARMOST_03266
Related to histidinol-phosphate transaminase.
    
 0.828
ARMOST_07220
Related to agmatinase; Belongs to the arginase family.
  
 
 0.779
ARMOST_08042
Related to agmatinase; Belongs to the arginase family.
  
 
 0.779
ARMOST_09405
Related to Putative agmatinase 1; Belongs to the arginase family.
  
 
 0.779
ARMOST_15604
Arginase; Belongs to the arginase family.
  
 
 0.779
ARMOST_21232
Related to arginase family protein; Belongs to the arginase family.
  
 
 0.779
ARMOST_09036
Aspartate aminotransferase.
   
 
 0.757
ARMOST_08745
Chorismate synthase.
  
 
 0.676
ARMOST_03917
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
  
 
 0.666
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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