STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_17171WD_REPEATS_REGION domain-containing protein. (432 aa)    
Predicted Functional Partners:
ARMOST_03783
Related to RLP24-Ribosomal Like Protein 24, part of a pre-60S complex.
   
 
 0.963
ARMOST_10676
Related to Ribosome production factor 2 homolog.
   
 
 0.942
ARMOST_09257
RNA helicase.
   
 
 0.915
ARMOST_08845
Uncharacterized protein.
   
 
 0.905
ARMOST_16320
Probable Ribosome biogenesis protein YTM1.
   
 
 0.903
ARMOST_03609
Related to Putative ribosomal RNA methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.896
ARMOST_08889
Probable NIP7-required for efficient 60S ribosome subunit biogenesis.
   
 
 0.893
ARMOST_10518
Peptidase_S9 domain-containing protein.
   
 
 0.886
ARMOST_00206
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.879
ARMOST_06807
Uncharacterized protein.
   
 
 0.879
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
Server load: low (16%) [HD]