STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_17854Uncharacterized protein. (490 aa)    
Predicted Functional Partners:
ARMOST_08985
Uncharacterized protein.
   
 
 0.631
ARMOST_01642
GRIP domain-containing protein.
    
 
 0.615
ARMOST_04072
Probable YPT6-GTP-binding protein of the rab family.
    
 
 0.430
ARMOST_06897
Probable YPT6-GTP-binding protein of the rab family.
    
 
 0.430
ARMOST_03123
Uncharacterized protein.
     
 0.415
ARMOST_11987
CHAT domain-containing protein.
     
 0.415
ARMOST_11974
CHAT domain-containing protein.
     
 0.415
ARMOST_04467
Related to dolichyl-phosphate-mannose-protein mannosyltransferase.
     
 0.412
ARMOST_07188
Related to PMT4-dolichyl-phosphate-mannose--protein O-mannosyltransferase.
     
 0.412
ARMOST_15718
Related to dolichyl-phosphate-mannose--protein mannosyltransferase.
     
 0.412
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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