STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_17901Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
ARMOST_09554
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.490
ARMOST_03368
Probable 25 kD subunit of DNA-directed RNA polymerases I, II and III.
    
  0.481
ARMOST_06925
Probable DNA-directed RNA polymerase II subunit rpb7.
    
  0.481
ARMOST_09346
Uncharacterized protein.
    
  0.481
ARMOST_02055
Related to DNA-directed RNA polymerase 13.3K chain.
    
  0.478
ARMOST_14844
Uncharacterized protein.
    
  0.478
ARMOST_16540
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.456
ARMOST_00909
Related to Endoribonuclease YSH1.
    
 0.455
ARMOST_05097
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.455
ARMOST_07278
Uncharacterized protein.
    
 0.455
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.