ARMOST_18316 protein (Armillaria ostoyae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ARMOST_18316

Uncharacterized protein. (176 aa)

Predicted Functional Partners:

EFM6

0.653

ARMOST_10508

0.630

ARMOST_01334

0.534

ARMOST_00008

0.533

ARMOST_12412

0.518

ARMOST_08038

0.517

ARMOST_09978

0.491

ARMOST_16812

0.491

ARMOST_09529

0.479

ARMOST_08862

0.476

Your Current Organism:

Armillaria ostoyae

NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARMOST_00008	ARMOST_01334	A0A284QJX9	A0A284QNP9	Uncharacterized protein.	Probable 3-hydroxybutyryl-CoA dehydrogenase.	0.534
ARMOST_00008	ARMOST_08038	A0A284QJX9	A0A284R7K6	Uncharacterized protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.517
ARMOST_00008	ARMOST_08862	A0A284QJX9	A0A284R9V1	Uncharacterized protein.	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.	0.476
ARMOST_00008	ARMOST_09529	A0A284QJX9	A0A284RBQ6	Uncharacterized protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.479
ARMOST_00008	ARMOST_09978	A0A284QJX9	A0A284RD01	Uncharacterized protein.	Related to dihydroxyacetone kinase.	0.491
ARMOST_00008	ARMOST_10508	A0A284QJX9	A0A284REL4	Uncharacterized protein.	Uncharacterized protein.	0.630
ARMOST_00008	ARMOST_12412	A0A284QJX9	A0A284RJV6	Uncharacterized protein.	Dihydrolipoyl dehydrogenase.	0.518
ARMOST_00008	ARMOST_16812	A0A284QJX9	A0A284RX93	Uncharacterized protein.	Related to Dihydroxyacetone kinase 1.	0.491
ARMOST_00008	ARMOST_18316	A0A284QJX9	A0A284S1H4	Uncharacterized protein.	Uncharacterized protein.	0.533
ARMOST_00008	EFM6	A0A284QJX9	A0A284QYZ2	Uncharacterized protein.	Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. METTL21 family. EFM6 subfamily.	0.653
ARMOST_01334	ARMOST_00008	A0A284QNP9	A0A284QJX9	Probable 3-hydroxybutyryl-CoA dehydrogenase.	Uncharacterized protein.	0.534
ARMOST_01334	ARMOST_09529	A0A284QNP9	A0A284RBQ6	Probable 3-hydroxybutyryl-CoA dehydrogenase.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.413
ARMOST_01334	ARMOST_18316	A0A284QNP9	A0A284S1H4	Probable 3-hydroxybutyryl-CoA dehydrogenase.	Uncharacterized protein.	0.534
ARMOST_08038	ARMOST_00008	A0A284R7K6	A0A284QJX9	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Uncharacterized protein.	0.517
ARMOST_08038	ARMOST_08862	A0A284R7K6	A0A284R9V1	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.	0.401
ARMOST_08038	ARMOST_09529	A0A284R7K6	A0A284RBQ6	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.854
ARMOST_08038	ARMOST_18316	A0A284R7K6	A0A284S1H4	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Uncharacterized protein.	0.517
ARMOST_08038	EFM6	A0A284R7K6	A0A284QYZ2	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. METTL21 family. EFM6 subfamily.	0.480
ARMOST_08862	ARMOST_00008	A0A284R9V1	A0A284QJX9	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.	Uncharacterized protein.	0.476
ARMOST_08862	ARMOST_08038	A0A284R9V1	A0A284R7K6	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.401