STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMOST_21352Uncharacterized protein. (499 aa)    
Predicted Functional Partners:
ARMOST_08807
WD_REPEATS_REGION domain-containing protein.
    
 0.578
ARMOST_09761
Related to Chromatin assembly factor 1 subunit c.
    
 0.541
ARMOST_10036
Uncharacterized protein.
   
 0.533
ARMOST_03530
SPRY domain-containing protein.
    
 0.502
ARMOST_04844
WD_REPEATS_REGION domain-containing protein.
    
 0.502
ARMOST_06749
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.475
ARMOST_06750
F-box domain-containing protein.
    
  0.475
ARMOST_11812
Histone H2A; Belongs to the histone H2A family.
    
  0.445
ARMOST_03883
Chromo domain-containing protein.
    
 0.409
ARMOST_07008
Chromo domain-containing protein.
    
 0.409
Your Current Organism:
Armillaria ostoyae
NCBI taxonomy Id: 47428
Other names: A. ostoyae, Armillaria sp. NABS1, Armillariella ostoyae
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