STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJA58616.1Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family. (229 aa)    
Predicted Functional Partners:
AJA58614.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.818
AJA58615.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.818
lptB
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.818
AJA58617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.818
lspA
Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
    0.817
AJA58619.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
AJA58620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.650
nadE
NAD+ synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD synthetase family.
  
  
 0.548
AJA58955.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.507
Your Current Organism:
Borrelia miyamotoi
NCBI taxonomy Id: 47466
Other names: B. miyamotoi, Borrelia miyamotonii, Borrelia miyamotonis, JCM 9579, strain HT31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.