STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS03659.1TonB-dependent Receptor Plug Domain. (1064 aa)    
Predicted Functional Partners:
SFS16033.1
TonB protein C-terminal.
  
   0.819
SFS15066.1
Protein TonB.
  
   0.787
SFS01681.1
Outer membrane transport energization protein TonB.
  
   0.785
SFS17728.1
TonB family C-terminal domain-containing protein.
  
   0.772
SFS20977.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.765
SFS09194.1
Protein TonB.
  
   0.755
SFS20752.1
Hypothetical protein.
  
     0.729
SFS05380.1
TonB family C-terminal domain-containing protein.
  
   0.716
SFS16420.1
Protein TonB.
  
   0.714
SFS20701.1
Ca-activated chloride channel family protein.
  
     0.707
Your Current Organism:
Granulicella pectinivorans
NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.