STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS09803.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (242 aa)    
Predicted Functional Partners:
SFS09610.1
Response regulator receiver domain-containing protein.
  
 0.853
SFS17773.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.818
SFS04966.1
Tetratricopeptide repeat-containing protein.
  
 0.769
SFS21467.1
Hpt domain-containing protein.
 
 
 0.665
SFS15769.1
Hypothetical protein.
 
 0.649
SFS05192.1
PAS domain S-box-containing protein.
  
 0.645
SFS17858.1
Small GTP-binding protein domain-containing protein.
    
  0.635
SFS13018.1
PAS domain S-box-containing protein.
   
 0.617
SFS13357.1
Thioredoxin reductase (NADPH).
   
 0.605
SFR97934.1
PAS domain S-box-containing protein.
   
 0.602
Your Current Organism:
Granulicella pectinivorans
NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.