STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS11091.1NitT/TauT family transport system permease protein. (286 aa)    
Predicted Functional Partners:
SFS11096.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.991
SFS11085.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.981
SFS11118.1
Urea carboxylase.
 
     0.869
SFS14923.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.865
SFR99395.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.864
SFS11107.1
Hypothetical protein.
 
     0.856
SFS14056.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.853
SFS11112.1
Hypothetical protein.
 
     0.849
SFS11121.1
Allophanate hydrolase.
 
     0.821
SFS11080.1
Planctomycete cytochrome C.
       0.734
Your Current Organism:
Granulicella pectinivorans
NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.