STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS14625.1Glutamine synthetase. (476 aa)    
Predicted Functional Partners:
SFS17773.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.966
SFS02374.1
Putative glutamine amidotransferase.
  
 
 0.846
SFS11118.1
Urea carboxylase.
  
 
 0.840
SFS01462.1
DNA-binding transcriptional regulator, MerR family.
  
 
 0.815
SFS21427.1
MerR family transcriptional regulator, heat shock protein HspR.
  
 
 0.815
SFS11271.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
     
 0.804
SFS12276.1
Thioredoxin reductase (NADPH).
    
 0.803
SFS18399.1
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.803
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
 
 
 0.780
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
 
 
 0.761
Your Current Organism:
Granulicella pectinivorans
NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.