Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR96993.1 | SFR97934.1 | SAMN05421771_0073 | SAMN05421771_0195 | Two component transcriptional regulator, LuxR family. | PAS domain S-box-containing protein. | 0.921 |
SFR96993.1 | SFS00871.1 | SAMN05421771_0073 | SAMN05421771_0523 | Two component transcriptional regulator, LuxR family. | PAS domain S-box-containing protein. | 0.923 |
SFR96993.1 | SFS05192.1 | SAMN05421771_0073 | SAMN05421771_1049 | Two component transcriptional regulator, LuxR family. | PAS domain S-box-containing protein. | 0.837 |
SFR96993.1 | SFS09610.1 | SAMN05421771_0073 | SAMN05421771_1674 | Two component transcriptional regulator, LuxR family. | Response regulator receiver domain-containing protein. | 0.983 |
SFR96993.1 | SFS13018.1 | SAMN05421771_0073 | SAMN05421771_2220 | Two component transcriptional regulator, LuxR family. | PAS domain S-box-containing protein. | 0.887 |
SFR96993.1 | SFS15769.1 | SAMN05421771_0073 | SAMN05421771_2778 | Two component transcriptional regulator, LuxR family. | Hypothetical protein. | 0.845 |
SFR96993.1 | SFS18350.1 | SAMN05421771_0073 | SAMN05421771_3437 | Two component transcriptional regulator, LuxR family. | Two component regulator propeller. | 0.837 |
SFR96993.1 | SFS20824.1 | SAMN05421771_0073 | SAMN05421771_3867 | Two component transcriptional regulator, LuxR family. | PAS domain S-box-containing protein. | 0.845 |
SFR96993.1 | SFS21467.1 | SAMN05421771_0073 | SAMN05421771_4207 | Two component transcriptional regulator, LuxR family. | Hpt domain-containing protein. | 0.887 |
SFR97934.1 | SFR96993.1 | SAMN05421771_0195 | SAMN05421771_0073 | PAS domain S-box-containing protein. | Two component transcriptional regulator, LuxR family. | 0.921 |
SFR97934.1 | SFS00871.1 | SAMN05421771_0195 | SAMN05421771_0523 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.997 |
SFR97934.1 | SFS05192.1 | SAMN05421771_0195 | SAMN05421771_1049 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.997 |
SFR97934.1 | SFS09610.1 | SAMN05421771_0195 | SAMN05421771_1674 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.997 |
SFR97934.1 | SFS13018.1 | SAMN05421771_0195 | SAMN05421771_2220 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.996 |
SFR97934.1 | SFS15769.1 | SAMN05421771_0195 | SAMN05421771_2778 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.995 |
SFR97934.1 | SFS18350.1 | SAMN05421771_0195 | SAMN05421771_3437 | PAS domain S-box-containing protein. | Two component regulator propeller. | 0.985 |
SFR97934.1 | SFS18353.1 | SAMN05421771_0195 | SAMN05421771_3438 | PAS domain S-box-containing protein. | Two component transcriptional regulator, LuxR family. | 0.921 |
SFR97934.1 | SFS20824.1 | SAMN05421771_0195 | SAMN05421771_3867 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.996 |
SFR97934.1 | SFS21467.1 | SAMN05421771_0195 | SAMN05421771_4207 | PAS domain S-box-containing protein. | Hpt domain-containing protein. | 0.997 |
SFS00871.1 | SFR96993.1 | SAMN05421771_0523 | SAMN05421771_0073 | PAS domain S-box-containing protein. | Two component transcriptional regulator, LuxR family. | 0.923 |
page 1 of 6