STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS20977.1Outer membrane receptor proteins, mostly Fe transport. (957 aa)    
Predicted Functional Partners:
SFS16033.1
TonB protein C-terminal.
  
   0.830
SFS01309.1
TonB-dependent Receptor Plug Domain.
  
 
  0.791
SFS06341.1
TonB-dependent Receptor Plug Domain.
  
 
  0.781
SFS17728.1
TonB family C-terminal domain-containing protein.
  
   0.776
SFS15066.1
Protein TonB.
  
   0.774
SFS03001.1
Uncharacterized conserved protein.
  
     0.773
SFS11133.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.773
SFS16994.1
GWxTD domain-containing protein.
  
     0.773
SFS20752.1
Hypothetical protein.
  
     0.773
SFS21150.1
VWFA-related domain-containing protein.
  
     0.773
Your Current Organism:
Granulicella pectinivorans
NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.