STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS21094.1Cytochrome c peroxidase. (349 aa)    
Predicted Functional Partners:
SFS21089.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
 
 0.954
SFS21092.1
Carboxypeptidase regulatory-like domain-containing protein.
 
     0.836
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.773
SFS21097.1
Alcohol dehydrogenase (cytochrome c).
       0.773
SFS20637.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
 
 0.771
SFS10566.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
 
 0.760
SFS13085.1
Hypothetical protein.
 
 
 0.760
SFR97675.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
 
 0.757
SFS09464.1
DNA-binding beta-propeller fold protein YncE.
 
 
 0.753
SFS14039.1
Lactonase, 7-bladed beta-propeller.
  
 
 0.752
Your Current Organism:
Granulicella pectinivorans
NCBI taxonomy Id: 474950
Other names: Acidobacteria bacterium TPB6011, DSM 21001, G. pectinivorans, Granulicella pectinivorans Pankratov and Dedysh 2010, VKM B-2509, strain TPB6011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.