STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM45586.1Predicted phage recombinase, RecA/RadA family. (115 aa)    
Predicted Functional Partners:
SEM45650.1
Hypothetical protein.
  
    0.844
SEM45572.1
Hypothetical protein.
  
    0.787
SEM45610.1
Hypothetical protein.
       0.773
SEM45625.1
Hypothetical protein.
       0.773
SEM45662.1
Hypothetical protein.
       0.765
SEM45546.1
Phage portal protein, lambda family.
  
    0.763
SEM45688.1
Hypothetical protein.
       0.717
SEM45699.1
Hypothetical protein.
       0.717
SEM45505.1
Phage terminase, large subunit GpA; Manually curated.
  
    0.704
SEM45490.1
Hypothetical protein.
  
    0.676
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.