Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM47612.1 | SEM48134.1 | SAMN05216180_0145 | SAMN05216180_0170 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Hypothetical protein. | 0.683 |
SEM47612.1 | SEM97273.1 | SAMN05216180_0145 | SAMN05216180_2280 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | [acyl-carrier-protein] S-malonyltransferase. | 0.938 |
SEM47612.1 | SEM97340.1 | SAMN05216180_0145 | SAMN05216180_2283 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.837 |
SEM47612.1 | SEM97353.1 | SAMN05216180_0145 | SAMN05216180_2284 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.940 |
SEM47612.1 | SEM97407.1 | SAMN05216180_0145 | SAMN05216180_2286 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.913 |
SEM47612.1 | SEN17847.1 | SAMN05216180_0145 | SAMN05216180_2987 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Nucleoside-diphosphate-sugar epimerase. | 0.421 |
SEM47612.1 | acpP | SAMN05216180_0145 | SAMN05216180_2290 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.502 |
SEM47612.1 | fabH | SAMN05216180_0145 | SAMN05216180_2281 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.857 |
SEM48134.1 | SEM47612.1 | SAMN05216180_0170 | SAMN05216180_0145 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.683 |
SEM48134.1 | SEM97273.1 | SAMN05216180_0170 | SAMN05216180_2280 | Hypothetical protein. | [acyl-carrier-protein] S-malonyltransferase. | 0.866 |
SEM48134.1 | SEM97340.1 | SAMN05216180_0170 | SAMN05216180_2283 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.705 |
SEM48134.1 | SEM97353.1 | SAMN05216180_0170 | SAMN05216180_2284 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.842 |
SEM48134.1 | SEM97407.1 | SAMN05216180_0170 | SAMN05216180_2286 | Hypothetical protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.850 |
SEM48134.1 | SEN07221.1 | SAMN05216180_0170 | SAMN05216180_2633 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.712 |
SEM48134.1 | SEN10007.1 | SAMN05216180_0170 | SAMN05216180_2764 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.692 |
SEM48134.1 | SEN17847.1 | SAMN05216180_0170 | SAMN05216180_2987 | Hypothetical protein. | Nucleoside-diphosphate-sugar epimerase. | 0.648 |
SEM48134.1 | acpP | SAMN05216180_0170 | SAMN05216180_2290 | Hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.713 |
SEM48134.1 | fabH | SAMN05216180_0170 | SAMN05216180_2281 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.868 |
SEM97273.1 | SEM47612.1 | SAMN05216180_2280 | SAMN05216180_0145 | [acyl-carrier-protein] S-malonyltransferase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.938 |
SEM97273.1 | SEM48134.1 | SAMN05216180_2280 | SAMN05216180_0170 | [acyl-carrier-protein] S-malonyltransferase. | Hypothetical protein. | 0.866 |
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