STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM48656.1Transglutaminase-like superfamily protein. (309 aa)    
Predicted Functional Partners:
SEM48689.1
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family.
  
     0.765
SEM53454.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.714
SEM65769.1
GlcNAc-PI de-N-acetylase.
  
     0.669
SEM56111.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.663
SEN09809.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.661
SEM48683.1
AmmeMemoRadiSam system protein B.
  
     0.633
SEN09875.1
Hypothetical protein.
  
     0.611
SEM61873.1
Cadherin-like beta sandwich domain-containing protein.
  
     0.559
SEM71502.1
Lysophospholipase L1.
  
    0.521
SEM84294.1
Hypothetical protein.
  
     0.496
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.