STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM48714.1Putative iron-only hydrogenase system regulator. (81 aa)    
Predicted Functional Partners:
SEN05866.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.989
SEM48733.1
Iron-only hydrogenase maturation protein HydE.
 
  
 0.955
SEM79602.1
Iron complex transport system substrate-binding protein.
  
 0.948
SEN05754.1
Iron complex transport system substrate-binding protein.
  
 0.948
SEM48768.1
Iron-only hydrogenase maturation protein HydF.
 
   
 0.936
SEM48755.1
2-iminoacetate synthase.
 
   
 0.914
SEM65319.1
Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase/precorrin-6A/cobalt-precorrin-6A reductase.
 
   
 0.529
SEM52609.1
iron(III) transport system permease protein.
   
  
 0.518
SEN05848.1
Iron complex transport system ATP-binding protein.
 
      0.485
SEM65231.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
  
  
 0.469
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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