STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM50174.1Two component transcriptional regulator, AraC family. (527 aa)    
Predicted Functional Partners:
SEM50185.1
Two-component system, sensor histidine kinase YesM.
 
  0.936
SEM79631.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.851
SEN10834.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.851
SEN09307.1
Two-component system, sensor histidine kinase YesM.
 
 
  0.816
SEM61562.1
Flagellar motor switch protein FliN/FliY.
  
 0.802
SEN05685.1
Two-component system, sensor histidine kinase YesM.
  
 
  0.798
SEM71433.1
Two-component system, sensor histidine kinase YesM.
 
 
  0.790
SEM47490.1
Two-component system, sensor histidine kinase YesM.
 
 
  0.789
SEM55654.1
Two-component system, sensor histidine kinase YesM.
 
 
  0.786
SEM99229.1
Cache domain-containing protein.
  
 
  0.783
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.