STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM54925.1Energy-coupling factor transport system ATP-binding protein. (233 aa)    
Predicted Functional Partners:
SEM54985.1
Energy-coupling factor transport system permease protein.
 
 0.994
ecfT
Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.980
SEM72561.1
ABC-2 type transport system ATP-binding protein.
 
 
 
0.930
SEM65484.1
Cobalt/nickel transport system permease protein.
  
 0.926
SEM54956.1
Energy-coupling factor transport system ATP-binding protein/energy-coupling factor transport system ATP-binding protein.
 
  
 
0.923
SEM64694.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  
 
0.919
SEM59138.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
     0.918
cbiM
Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 0.906
SEN15674.1
Putative ABC transport system ATP-binding protein.
 
  
 
0.904
SEM78475.1
Branched-chain amino acid transport system ATP-binding protein.
 
    
0.901
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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