STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM59655.1Malate dehydrogenase (oxaloacetate-decarboxylating). (389 aa)    
Predicted Functional Partners:
SEN00802.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.964
SEM94265.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.939
SEM76591.1
Fumarate hydratase subunit beta.
 
 
 0.905
SEM54686.1
Dihydrolipoamide dehydrogenase.
  
 
 0.871
SEM94046.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.863
SEM51697.1
Putative selenate reductase.
  
 
 0.860
SEM76610.1
Fumarate hydratase subunit alpha.
  
 
 0.855
SEM76945.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.855
SEM81250.1
Thioredoxin-like [2Fe-2S] ferredoxin.
    
 0.851
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
     
 0.841
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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