STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM61182.1Glycosyl hydrolase family 20, catalytic domain. (627 aa)    
Predicted Functional Partners:
SEM69685.1
PTS system IIA component, Glc family.
  
  
 0.999
SEM69666.1
PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
  
  
 0.993
SEM84883.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
  
 0.993
SEM93952.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
  
 0.993
SEM61102.1
Beta-glucosidase.
 
  
 0.859
SEN10397.1
Chitobiose phosphorylase.
  
  
 0.850
SEN16990.1
beta-N-acetylhexosaminidase.
    
 0.837
SEM63088.1
Cyclic beta-1,2-glucan synthetase.
     
 0.805
SEM61205.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.780
SEM61224.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.780
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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