STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM61237.1Putative aldouronate transport system substrate-binding protein. (492 aa)    
Predicted Functional Partners:
SEM61224.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.955
SEM61205.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
  0.941
SEM61300.1
Alpha-mannosidase.
 
     0.865
SEM75529.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.816
SEN17127.1
Putative aldouronate transport system permease protein.
  
  0.816
SEM75555.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Manually curated.
 
 
  0.806
SEN17157.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
  0.786
SEM61182.1
Glycosyl hydrolase family 20, catalytic domain.
 
     0.777
SEN09207.1
Hypothetical protein.
  
     0.774
SEM61284.1
Beta-1,4-mannooligosaccharide/beta-1, 4-mannosyl-N-acetylglucosamine phosphorylase.
 
     0.754
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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