Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM51144.1 | SEM51165.1 | SAMN05216180_0332 | SAMN05216180_0333 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.926 |
SEM51144.1 | SEM58858.1 | SAMN05216180_0332 | SAMN05216180_0733 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | O-acetylhomoserine (thiol)-lyase. | 0.908 |
SEM51144.1 | SEM62277.1 | SAMN05216180_0332 | SAMN05216180_0917 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Serine O-acetyltransferase. | 0.585 |
SEM51144.1 | SEM62296.1 | SAMN05216180_0332 | SAMN05216180_0918 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Cysteine synthase. | 0.972 |
SEM51144.1 | SEM98707.1 | SAMN05216180_0332 | SAMN05216180_2344 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Aminotransferase. | 0.627 |
SEM51144.1 | SEN09440.1 | SAMN05216180_0332 | SAMN05216180_2739 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Cystathionine gamma-synthase. | 0.948 |
SEM51144.1 | SEN15496.1 | SAMN05216180_0332 | SAMN05216180_2921 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Cystathionine gamma-lyase. | 0.948 |
SEM51144.1 | guaA | SAMN05216180_0332 | SAMN05216180_1148 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.732 |
SEM51144.1 | serC | SAMN05216180_0332 | SAMN05216180_2085 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.474 |
SEM51165.1 | SEM51144.1 | SAMN05216180_0333 | SAMN05216180_0332 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.926 |
SEM51165.1 | SEM58858.1 | SAMN05216180_0333 | SAMN05216180_0733 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | O-acetylhomoserine (thiol)-lyase. | 0.947 |
SEM51165.1 | SEM62277.1 | SAMN05216180_0333 | SAMN05216180_0917 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Serine O-acetyltransferase. | 0.789 |
SEM51165.1 | SEM62296.1 | SAMN05216180_0333 | SAMN05216180_0918 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Cysteine synthase. | 0.920 |
SEM51165.1 | SEM98707.1 | SAMN05216180_0333 | SAMN05216180_2344 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Aminotransferase. | 0.880 |
SEM51165.1 | SEN09440.1 | SAMN05216180_0333 | SAMN05216180_2739 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Cystathionine gamma-synthase. | 0.962 |
SEM51165.1 | SEN15496.1 | SAMN05216180_0333 | SAMN05216180_2921 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Cystathionine gamma-lyase. | 0.962 |
SEM51165.1 | cysS | SAMN05216180_0333 | SAMN05216180_2014 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.896 |
SEM51165.1 | guaA | SAMN05216180_0333 | SAMN05216180_1148 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.724 |
SEM51165.1 | serC | SAMN05216180_0333 | SAMN05216180_2085 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.412 |
SEM58858.1 | SEM51144.1 | SAMN05216180_0733 | SAMN05216180_0332 | O-acetylhomoserine (thiol)-lyase. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.908 |
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