STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM64728.1Amino acid ABC transporter substrate-binding protein, PAAT family. (272 aa)    
Predicted Functional Partners:
SEM64709.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.999
SEM66387.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.998
SEM56240.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.989
SEM64694.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.980
SEM66408.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.957
SEM56257.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.934
SEM59023.1
Chorismate mutase / prephenate dehydratase.
     
 0.878
argH
Argininosuccinate lyase.
  
  
 0.792
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.782
SEM62801.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.718
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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