STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM71433.1Two-component system, sensor histidine kinase YesM. (594 aa)    
Predicted Functional Partners:
SEM71454.1
Two-component system, response regulator YesN.
 
  0.925
SEM75852.1
Two component transcriptional regulator, LytTR family.
  
 
 0.840
SEM71414.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
   0.838
SEM47387.1
Two-component system, response regulator YesN.
 
  0.836
SEM55636.1
Two component transcriptional regulator, AraC family.
 
  0.834
SEM50174.1
Two component transcriptional regulator, AraC family.
 
 
  0.790
SEM83489.1
Two component transcriptional regulator, LytTR family.
  
 
 0.762
SEM99207.1
Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
 
 
  0.737
SEN09233.1
Two-component system, response regulator YesN.
 
 
  0.721
SEM48959.1
Two-component system, response regulator YesN.
  
 
  0.712
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.