STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM72501.1Transcriptional regulator, contains XRE-family HTH domain. (102 aa)    
Predicted Functional Partners:
SEM72477.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
 
    
0.644
SEM72391.1
AAA domain-containing protein.
  
     0.601
SEM83335.1
Transposase IS116/IS110/IS902 family protein.
  
     0.596
SEM72428.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
    0.554
SEM74640.1
Hypothetical protein.
  
     0.542
SEM72524.1
Sporulation initiation factor Spo0A C terminal.
       0.527
SEM85428.1
Sortase, SrtB family.
    
 0.515
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
 0.515
SEM72320.1
Hypothetical protein.
  
  0.467
SEM94265.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.455
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
Server load: low (18%) [HD]