Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEM47260.1 | SEM51165.1 | SAMN05216180_0127 | SAMN05216180_0333 | Alcohol dehydrogenase (NADP+). | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.870 |
| SEM47260.1 | SEM68485.1 | SAMN05216180_0127 | SAMN05216180_1263 | Alcohol dehydrogenase (NADP+). | Homoserine dehydrogenase. | 0.543 |
| SEM47260.1 | SEM80512.1 | SAMN05216180_0127 | SAMN05216180_1825 | Alcohol dehydrogenase (NADP+). | Hypothetical protein. | 0.848 |
| SEM47260.1 | SEN09440.1 | SAMN05216180_0127 | SAMN05216180_2739 | Alcohol dehydrogenase (NADP+). | Cystathionine gamma-synthase. | 0.482 |
| SEM47260.1 | SEN15496.1 | SAMN05216180_0127 | SAMN05216180_2921 | Alcohol dehydrogenase (NADP+). | Cystathionine gamma-lyase. | 0.482 |
| SEM48924.1 | SEM51165.1 | SAMN05216180_0211 | SAMN05216180_0333 | Diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.850 |
| SEM48924.1 | SEM80512.1 | SAMN05216180_0211 | SAMN05216180_1825 | Diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein. | Hypothetical protein. | 0.807 |
| SEM51165.1 | SEM47260.1 | SAMN05216180_0333 | SAMN05216180_0127 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Alcohol dehydrogenase (NADP+). | 0.870 |
| SEM51165.1 | SEM48924.1 | SAMN05216180_0333 | SAMN05216180_0211 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein. | 0.850 |
| SEM51165.1 | SEM51200.1 | SAMN05216180_0333 | SAMN05216180_0335 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | 0.999 |
| SEM51165.1 | SEM68485.1 | SAMN05216180_0333 | SAMN05216180_1263 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Homoserine dehydrogenase. | 0.965 |
| SEM51165.1 | SEM80512.1 | SAMN05216180_0333 | SAMN05216180_1825 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Hypothetical protein. | 0.720 |
| SEM51165.1 | SEN09440.1 | SAMN05216180_0333 | SAMN05216180_2739 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Cystathionine gamma-synthase. | 0.962 |
| SEM51165.1 | SEN15496.1 | SAMN05216180_0333 | SAMN05216180_2921 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Cystathionine gamma-lyase. | 0.962 |
| SEM51165.1 | gcvT | SAMN05216180_0333 | SAMN05216180_0317 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.942 |
| SEM51165.1 | metG | SAMN05216180_0333 | SAMN05216180_1719 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.867 |
| SEM51200.1 | SEM51165.1 | SAMN05216180_0335 | SAMN05216180_0333 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.999 |
| SEM51200.1 | SEM68485.1 | SAMN05216180_0335 | SAMN05216180_1263 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Homoserine dehydrogenase. | 0.857 |
| SEM51200.1 | SEM80512.1 | SAMN05216180_0335 | SAMN05216180_1825 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Hypothetical protein. | 0.847 |
| SEM51200.1 | SEN09440.1 | SAMN05216180_0335 | SAMN05216180_2739 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Cystathionine gamma-synthase. | 0.892 |
page 1 of 4