Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEM84558.1 | SEM84584.1 | SAMN05216180_2019 | SAMN05216180_2020 | Protein of unknown function. | 5'-deoxynucleotidase. | 0.773 |
| SEM84558.1 | SEM84596.1 | SAMN05216180_2019 | SAMN05216180_2021 | Protein of unknown function. | Uncharacterized membrane protein YfhO. | 0.480 |
| SEM84558.1 | SEM84621.1 | SAMN05216180_2019 | SAMN05216180_2022 | Protein of unknown function. | Glycosyltransferase involved in cell wall bisynthesis. | 0.458 |
| SEM84558.1 | recA | SAMN05216180_2019 | SAMN05216180_2018 | Protein of unknown function. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.428 |
| SEM84558.1 | recX | SAMN05216180_2019 | SAMN05216180_2017 | Protein of unknown function. | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.428 |
| SEM84584.1 | SEM84558.1 | SAMN05216180_2020 | SAMN05216180_2019 | 5'-deoxynucleotidase. | Protein of unknown function. | 0.773 |
| SEM84584.1 | SEM84596.1 | SAMN05216180_2020 | SAMN05216180_2021 | 5'-deoxynucleotidase. | Uncharacterized membrane protein YfhO. | 0.504 |
| SEM84584.1 | SEM84621.1 | SAMN05216180_2020 | SAMN05216180_2022 | 5'-deoxynucleotidase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.458 |
| SEM84584.1 | recA | SAMN05216180_2020 | SAMN05216180_2018 | 5'-deoxynucleotidase. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.428 |
| SEM84584.1 | recX | SAMN05216180_2020 | SAMN05216180_2017 | 5'-deoxynucleotidase. | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.428 |
| SEM84596.1 | SEM84558.1 | SAMN05216180_2021 | SAMN05216180_2019 | Uncharacterized membrane protein YfhO. | Protein of unknown function. | 0.480 |
| SEM84596.1 | SEM84584.1 | SAMN05216180_2021 | SAMN05216180_2020 | Uncharacterized membrane protein YfhO. | 5'-deoxynucleotidase. | 0.504 |
| SEM84596.1 | SEM84621.1 | SAMN05216180_2021 | SAMN05216180_2022 | Uncharacterized membrane protein YfhO. | Glycosyltransferase involved in cell wall bisynthesis. | 0.894 |
| SEM84596.1 | recX | SAMN05216180_2021 | SAMN05216180_2017 | Uncharacterized membrane protein YfhO. | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.401 |
| SEM84621.1 | SEM84558.1 | SAMN05216180_2022 | SAMN05216180_2019 | Glycosyltransferase involved in cell wall bisynthesis. | Protein of unknown function. | 0.458 |
| SEM84621.1 | SEM84584.1 | SAMN05216180_2022 | SAMN05216180_2020 | Glycosyltransferase involved in cell wall bisynthesis. | 5'-deoxynucleotidase. | 0.458 |
| SEM84621.1 | SEM84596.1 | SAMN05216180_2022 | SAMN05216180_2021 | Glycosyltransferase involved in cell wall bisynthesis. | Uncharacterized membrane protein YfhO. | 0.894 |
| recA | SEM84558.1 | SAMN05216180_2018 | SAMN05216180_2019 | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Protein of unknown function. | 0.428 |
| recA | SEM84584.1 | SAMN05216180_2018 | SAMN05216180_2020 | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 5'-deoxynucleotidase. | 0.428 |
| recA | recX | SAMN05216180_2018 | SAMN05216180_2017 | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.993 |
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