STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM85792.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (503 aa)    
Predicted Functional Partners:
SEM85817.1
Two-component system, response regulator YesN.
 
 
  0.948
SEM75852.1
Two component transcriptional regulator, LytTR family.
  
 
 0.847
SEM83489.1
Two component transcriptional regulator, LytTR family.
  
 
 0.779
SEM85836.1
Hypothetical protein.
       0.773
SEM50174.1
Two component transcriptional regulator, AraC family.
  
 
  0.746
SEM99207.1
Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
 
 
  0.737
SEM47387.1
Two-component system, response regulator YesN.
  
 
  0.733
SEM71454.1
Two-component system, response regulator YesN.
  
 
  0.721
SEM66200.1
Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
  
 
  0.694
SEM85161.1
Two component transcriptional regulator, AraC family.
  
 
  0.688
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
Server load: low (22%) [HD]