STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM99267.1Raffinose/stachyose/melibiose transport system permease protein. (289 aa)    
Predicted Functional Partners:
SEM99288.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.975
SEM77281.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.957
SEN15429.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.900
SEN16640.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.900
SEM72130.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.898
SEM49289.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.897
SEM49960.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.897
SEM82973.1
Multiple sugar transport system permease protein.
 
  0.896
SEN05437.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.895
SEM99394.1
Multiple sugar transport system permease protein/raffinose/stachyose/melibiose transport system permease protein.
 
  0.894
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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