STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM99561.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
SEM99507.1
Hypothetical protein.
       0.773
SEM99523.1
Stage V sporulation protein G; Belongs to the SpoVG family.
       0.773
SEM99581.1
Chromosome partitioning protein.
       0.550
SEM99593.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
       0.550
SEM99617.1
Chromosome partitioning protein, ParB family.
       0.550
SEM99646.1
Adenine-specific DNA methylase, N12 class.
       0.550
SEM99673.1
5' nucleotidase, deoxy (Pyrimidine), type C protein (NT5C).
       0.546
SEM99487.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.509
Your Current Organism:
Hydrogenoanaerobacterium saccharovorans
NCBI taxonomy Id: 474960
Other names: AS 1.5070, Clostridium sp. SW512, Clostridium sp. W72, H. saccharovorans, Hydrogenoanaerobacterium saccharovorans Song and Dong 2009, JCM 14861, strain SW512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.